opentargets-databaselisted

# Open Targets Database Skill ## Overview This skill provides access to the Open Targets Platform GraphQL API. It aggregates multi-modal evidence from genetics (GWAS/eQTL), pathways, animal models, and clinical trials to rank target-disease associations and identify druggable genes. ## Prerequisites 1. **`uv`**: Read the `uv` skill and follow its Setup instructions to ensure `uv` is installed and on PATH. 2. **User Notification**: If .licenses/opentargets_database_LICENSE.txt does not already exist in the workspace root directory then (1) prominently notify the user to check the terms at https://platform-docs.opentargets.org/licence, then (2) create the file recording the notification text and timestamp. ## Core Rules - **Use the Wrapper**: ALWAYS execute the provided helper scripts to query the database rather than accessing the database directly. The scripts automatically enforce fair use and implement retry logic. - **Output Flag**: The `--output` flag is always required as output can be very large. Use `jq` or write your own code to process this JSON file. - **Notification**: If this skill is used, ensure this is mentioned in the output. ## Quick Reference Always use the provided Python script `scripts/query_opentargets.py` to quickly query the database. It handles API communication, retries, formatting, and automatically truncates overly large responses. NEVER write your own curl or similar requests. **Usage:** ```bas