extract-health-datalisted
Install: claude install-skill OpenBioHack/openbiohack
# Extract-Health-Data
Turns raw materials into trustworthy, pattern-ready data in two phases: **Phase A**
extracts each source faithfully and traceably; **Phase B** compiles cross-source views
(timeline, lab-trends, and others) once, so downstream work can spot patterns without
redoing the compilation each time. Both phases reorganise data only — they never
interpret, conclude, or flag. That is downstream work.
## Use the highest-capability model available
Extraction error rates scale inversely with model capability. The cost of one careful
extraction with the best model is far smaller than the cost of an investigation built
on bad data. Default to the top-tier model available (Opus over Sonnet over Haiku) for
this work. Lower-tier models routinely make the silent transcription errors this skill
is built to prevent.
## Principles — apply to every extracted item
These rules are universal. They apply regardless of source type or output shape. Output
shape itself is not prescribed — use whatever structure (table, list, sections) faithfully
represents the source while following these principles.
- **Verbatim originals are canonical.** The source file is the truth. The extracted
markdown is an interpretation. When they disagree, the source wins.
- **Loss-less to STRUCTURE, not just to values — the extraction is a representation, never
a summary.** Preserve not only every individual value but the source's entire internal
*structure*: its ordering, grouping, sectioning,