reviewlisted

Review the gene specified in $ARGUMENTS. * ORGANISM should typically be a uniprot species code (in a few cases we use lowercase GO names) * GENE_SYMBOL should be the human readable gene symbol for that org IMPORTANT: you MUST consult the annotation-reviewer.md subagent for this task. ## Step 1: Ensure gene data is fetched Run `just fetch-gene ORGANISM GENE_SYMBOL` if the gene directory doesn't exist yet. ## Step 2: Run deep research AND publication caching in parallel Publication caching only needs the GOA file (created by fetch-gene), so it can run concurrently with deep research. Launch both at the same time: - **Deep research**: If the user specifies a deep research provider(s), use that provider(s), otherwise default to falcon. Use `--fallback perplexity-lite` so that if the primary provider times out, it automatically retries with perplexity-lite. E.g. `just deep-research-falcon ORGANISM GENE_SYMBOL --fallback perplexity-lite` - **Publication caching**: `just fetch-gene-pmids ORGANISM GENE_SYMBOL` Run these two steps **in parallel** (e.g. as concurrent background agents or shell jobs). Do NOT wait for deep research to finish before starting publication caching. ## Step 3: Fetch additional data (bacterial organisms) For bacterial organisms (e.g. PSEPK, ECOLI, SALTY, or any prokaryote), after deep research, also fetch FEBA/RB-TnSeq fitness data if available: ``` just fetch-fitness ORGANISM GENE_SYMBOL ``` This creates a GENE-fitness.md file with mutant fi