exploratory-data-analysislisted
Install: claude install-skill fmschulz/omics-skills
# Exploratory Data Analysis
## Overview
Inspect scientific files before downstream analysis. The bundled script recognizes more than 100 simple and compound suffixes and writes a bounded Markdown report. It performs content-level analysis only for the common formats listed below; other recognized formats receive file metadata and a reference-catalog entry.
The six reference files contain 239 format entries. Some entries describe the same suffix in different domain contexts, so this is not a count of unique formats or implemented parsers.
**Bundled content parsers:**
- NumPy arrays (`.npy`, `.npz`), CSV/TSV samples, JSON, and HDF5
- FASTA and FASTQ, including common gzip-compressed suffixes
- TIFF/OME-TIFF, PNG, and JPEG raster images
- Reference-only metadata for every other recognized suffix
- Representative streaming analyzers for PDB/SDF/SMILES, MGF/mzML/mzXML, and mzTab families; proprietary binary formats remain reference-only unless their project environment supplies a reader.
## When to Use This Skill
Use this skill when:
- User provides a path to a scientific data file for analysis
- User asks to "explore", "analyze", or "summarize" a data file
- User wants to understand the structure and content of scientific data
- User needs a structure-and-quality report before analysis
- User wants to assess data quality or completeness
- User asks what type of analysis is appropriate for a file
## Quick Reference
| Task | Action |
|------|--------|
| Unknown file | Detec