research-overview-pipelinelisted
Install: claude install-skill panjose/Co-Scientist
# research-overview-pipeline
Goal:
- Generate the final research overview from the top-ranked hypotheses.
Inputs:
- `research_plan/RESEARCH_PLAN.json`
- top-ranked `hypotheses/<id>/HYPOTHESIS.json` artifacts with completed review payloads
- optional `meta/INSIGHTS_FROM_REVIEWS.json`
Outputs:
- `meta/RESEARCH_OVERVIEW.json`
- updated `state/PIPELINE_STATE.json`
- updated `state/CURRENT_STAGE.json`
Context Loading:
- Read `research_plan/RESEARCH_PLAN.json`.
- Read `packages/agent_contracts/pipeline_runtime.py` before updating `state/PIPELINE_STATE.json` or `state/CURRENT_STAGE.json`.
- Read `state/EVOLUTION_STATE.json` before writing the overview.
- Read `literature/queries/*/EVIDENCE_BUNDLE.json` when literature artifacts exist and record whether any `retrieval_metadata.status` is `partial` or `blocked`.
- Read `state/PROXIMITY_STATUS.json` when it exists and record whether proximity was `succeeded` or degraded to a skipped/failed fallback state.
- Use `research_goal` as the synthesis anchor.
- Use `preferences` and `constraints` to frame which research directions are worth elevating.
- Read the current top-ranked hypothesis artifacts together with their embedded or adjacent review results.
- If `meta/INSIGHTS_FROM_REVIEWS.json` exists, use it to highlight recurring critique patterns and unresolved risks across the run.
Execution Prompt Contract:
- System Intent:
- You are synthesizing the strongest current hypotheses into a final research overview.
- Required Reas