bioresearcher-onboardlisted

# BioMCP Project-Local Onboarding This skill sets up a self-contained, project-local BioMCP runtime in your working directory under `.bioresearcher-runtime/`. ## What it does - Checks if the host has Node.js >= 22.13. If missing, downloads a pinned, cryptographically verified portable Node.js LTS binary into `.bioresearcher-runtime/node/` (zero global installation, does not touch `~` or `/usr/local`). - Auto-detects network conditions (official distribution vs. fast npmmirror in mainland China). - Installs `biomcp` locally into `.bioresearcher-runtime/node_modules/` with sub-100ms startup latency and offline resilience. - Configures optional features (R analysis, Biowasm genomics, SQLite database) and registers the server in your harness configuration (`opencode.json`, `.mcp.json`, etc.) without overwriting existing settings. - Verifies the configuration using the built-in diagnostic doctor. ## Steps Follow the steps below in order. ### Step 1: Run Stage 0 Bootstrap Execute the bootstrap script corresponding to your operating system. **For Unix-like shells (Linux, macOS, Git Bash):** ```bash bash skills/bioresearcher-onboard/scripts/bootstrap.sh ``` **For Windows (PowerShell):** ```powershell powershell -NoProfile -ExecutionPolicy Bypass -File skills\bioresearcher-onboard\scripts\bootstrap.ps1 ``` The script automatically: 1. Reuses your host Node.js if version >= 22.13 is available. 2. If missing, downloads and verifies the official portable Node.js