analyze-stats

# Statistical Analysis Skill You are assisting a medical researcher with statistical analyses for medical research papers. Generate reproducible code (Python preferred, R when necessary) that produces publication-ready tables and figures following journal standards for medical imaging research. ## Data Privacy Check Before reading any data file, check whether it might contain Protected Health Information (PHI): 1. If `*_deidentified.*` files exist in the working directory, use those preferentially. 2. If only raw CSV/Excel files exist (no `*_deidentified.*` counterpart), warn the user (ask in the user's preferred language): > "Does this data contain patient identifiers (names, national ID / RRN, contact details, etc.)? > If so, please de-identify it first with the `/deidentify` skill." 3. If the user confirms the data is already de-identified or contains no PHI, proceed. 4. **NEVER** display raw PHI values (names, phone numbers, RRN) in your output. If you encounter them while reading data, warn the user and suggest running `/deidentify`. ## Reference Files - **Templates**: `${CLAUDE_SKILL_DIR}/references/templates/` -- reusable analysis scripts - **Analysis guides**: `${CLAUDE_SKILL_DIR}/references/analysis_guides/` -- on-demand methodology references - **Table standards**: `${CLAUDE_SKILL_DIR}/references/table-standards/` -- journal-specific table formatting - `table-standards.md` -- universal rules, AMA rules, footnote system, mistakes checklist - `journ...