folklore-variant-evidence

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Retrieve ClinGen gene-disease validity assertions for a public gene or disease, and review source-linked public evidence and literature for one supported GRCh38 germline nuclear SNV or simple indel through Folklore Clinical Variant Interpretation MCP. Use when a scientific agent must branch deterministically on resolved, ambiguous, not-found, invalid, unsupported, or unavailable variant outcomes; chain a resolved public variant into related literature or publication details; or preserve evidence provenance without accepting patient, phenotype, family, segregation, or private case data.

Code & Development 46,700 stars 4221 forks Updated 5 days ago MIT

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# Folklore Variant Evidence Use Folklore Clinical Variant Interpretation MCP to retrieve structured public variant evidence, automated variant-level ACMG/AMP decision support, provenance, and source-linked literature for professional review. Keep the workflow limited to public identifiers and preserve every explicit outcome state. Adapter 1.5.0 also provides ClinGen Gene-Disease Validity assertions; source coverage is bounded, not every known association. Folklore Clinical Variant Interpretation MCP is published by Helena Bioinformatics. Its hosted endpoint is: ```text https://api.helena.bio/folklore/v1/mcp ``` No account or API key is required. The public Apache-2.0 adapter and contract are available at <https://github.com/helena-bioinformatics/folklore-mcp>. ## Minimal connection example A host without native MCP support can make the same public JSON-RPC call: ```bash curl --silent --show-error --fail-with-body --max-time 60 \ -X POST https://api.helena.bio/folklore/v1/mcp \ -H 'Content-Type: application/json' \ -H 'Accept: application/json, text/event-stream' \ -H 'MCP-Protocol-Version: 2026-07-28' \ -H 'Mcp-Method: tools/call' \ -H 'Mcp-Name: search_variant_evidence' \ -d '{"jsonrpc":"2.0","id":1,"method":"tools/call","params":{"_meta":{"io.modelcontextprotocol/protocolVersion":"2026-07-28","io.modelcontextprotocol/clientCapabilities":{}},"name":"search_variant_evidence","arguments":{"assembly":"GRCh38","query":"rs80357914"}}}' ``` Inspect the return...

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Author
K-Dense-AI
Repository
K-Dense-AI/scientific-agent-skills
Created
11 months ago
Last Updated
5 days ago
Language
Python
License
MIT

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