ga4gh-standards-validator

Solid

GA4GH standards compliance skill for data sharing and interoperability

AI & Automation 814 stars 53 forks Updated today MIT

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Quality Score: 93/100

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Skill Content

# GA4GH Standards Validator Skill ## Purpose Provide GA4GH standards compliance for data sharing and interoperability. ## Capabilities - VCF/BAM format validation - htsget API compliance - Beacon protocol testing - DRS/WES/TES compliance - Data model validation - Interoperability testing ## Usage Guidelines - Validate file formats against specifications - Test API compliance for data sharing - Implement Beacon for variant queries - Ensure workflow execution standards compliance - Validate data models for exchange - Document compliance status ## Dependencies - GA4GH toolkits - htslib - Beacon v2 ## Process Integration - Genomic Data Governance (genomic-data-governance) - Reproducible Research Workflow (reproducible-research)

Details

Author: a5c-ai
Repository: a5c-ai/babysitter
Created: 4 months ago
Last Updated: today
Language: JavaScript
License: MIT

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