igv-genome-browser

Solid

IGV integration skill for interactive genome visualization and review

AI & Automation 814 stars 53 forks Updated today MIT

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Quality Score: 93/100

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Description 5%

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Skill Content

# IGV Genome Browser Skill ## Purpose Enable IGV integration for interactive genome visualization and review. ## Capabilities - BAM/VCF/BED visualization - Batch screenshot generation - Session management - Track customization - Region navigation - Multi-sample comparison ## Usage Guidelines - Load appropriate reference genome - Configure tracks for analysis needs - Generate batch screenshots for reports - Save sessions for reproducibility - Navigate to regions of interest - Compare multiple samples visually ## Dependencies - IGV - IGV.js - JBrowse2 ## Process Integration - Clinical Variant Interpretation (clinical-variant-interpretation) - Tumor Molecular Profiling (tumor-molecular-profiling) - Whole Genome Sequencing Pipeline (wgs-analysis-pipeline)

Details

Author: a5c-ai
Repository: a5c-ai/babysitter
Created: 4 months ago
Last Updated: today
Language: JavaScript
License: MIT

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