ucsc-genome-browser-querier

# UCSC Genome Browser Querier Skill ## Purpose Provide UCSC Genome Browser queries for genome annotation retrieval and track data access. ## Capabilities - Track data retrieval - Custom track upload - Genome annotation queries - Conservation score extraction - Table browser queries - bigWig/bigBed handling ## Usage Guidelines - Query relevant annotation tracks - Upload custom data for visualization - Extract conservation scores for analysis - Use Table Browser for data extraction - Handle bigWig/bigBed formats efficiently - Document genome assembly versions ## Dependencies - UCSC API - kent utilities - pyBigWig ## Process Integration - Whole Genome Sequencing Pipeline (wgs-analysis-pipeline) - RNA-seq Differential Expression Analysis (rnaseq-differential-expression)